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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015885451.1_cds_XP_016439435.1_34990
CDS Infomation

[gene=LOC107765323] [db_xref=GeneID:107765323] [protein=E3 ubiquitin-protein ligase PRT1-like] [protein_id=XP_016439435.1] [location=complement(join(852..1096,1439..1633,1749..2075,4191..4370,4465..4493,4620..4696))] [gbkey=CDS]
Sequence

ATGGAAAATGGCCAAGAAAATCATGAAAACATTCAAACTGAAGAAATCCCAGATGAATTT
CAATGCTGTGTTTGCCTGGAACTTTTGTATAAACCAGTTGTGCTAGGGTGTGGCCACATT
GCTTGTTTCTGGTGTATATTTAAGTCCATGAATACTTTGATGGAGTCAAACTGTCCCATT
TGTCGTCACCCTTATCATCATTTCCCTAGTGTGTGTAGATTGATGCACTTTTTGCTTGTA
AAGTTGTACCCTTTAGACAGTGCAAGAAGGGAAAAACAAGTGGCAGAGGAGGAGAAGGAA
GTAGGATATTTTTCACCTCAGTTTGATGATTATTTATCAGAATCCTGTGGCAAGACCGAT
CTTGTTCTAGACACGGCTTCACTTCATTCCATCCCTTCACAGAAATGTGGATCAGCAGGG
GAAGGAGAGCATTCCTCAGTAGTTTTTCCTGCAATATCATGTTCTGAAACCAAAGAGGAT
GCAAAGTCAAAGAATCTTAATTTTGCAGATGAGCATACAAGTGCAAGCAGTAAGCAAGTG
CTTATCACAGATTTGCTTTGTGGGATCTGCAAACTGTTGTTGTACCGACCTGTAGTTCTT
AACTGTGGCCATGTTTATTGTGAAAATTGTGTGATCAATCCTAGCGACAAGCTATGTAGA
TGTCCAGGTTGCCAACTGGAGCATCCAAATGGATACCCCAACGTTTGCTTGGTTCTTGAG
CACTTCTTAGAAGAGCAATTTCCCAAGCTGTATGCAGAAAGGAAAAGCGCATCAGTGGAT
AGATCTAATCGTCAGATTCCAGCAACACGAGATCAGGACGAAGCTGCTAGTTGCAAATCA
CTACCTAAATTTGATCTTTCAACATGGTTAACGGGTGGAGGACCGCAGGTTCATTTTGGA
GTCGGTTGTGATTATTGTGGGGTAAGATTGGCTTCTCTTTCATTCTTGTCCAATTTCCCT
GCTTGTACATGCTTCCAGTTTTTTTACAGGAACAAGTCTAGAGAGTCTATGAGAGGCTCC
TGGATTGTTTTCAGATTGAGAATGTTTAAGTGA

Peptide Sequence

PEP ID

XP_016439435.1
PEP Infomation

PREDICTED: E3 ubiquitin-protein ligase PRT1-like [Nicotiana tabacum]
Sequence

MENGQENHENIQTEEIPDEFQCCVCLELLYKPVVLGCGHIACFWCIFKSMNTLMESNCPI
CRHPYHHFPSVCRLMHFLLVKLYPLDSARREKQVAEEEKEVGYFSPQFDDYLSESCGKTD
LVLDTASLHSIPSQKCGSAGEGEHSSVVFPAISCSETKEDAKSKNLNFADEHTSASSKQV
LITDLLCGICKLLLYRPVVLNCGHVYCENCVINPSDKLCRCPGCQLEHPNGYPNVCLVLE
HFLEEQFPKLYAERKSASVDRSNRQIPATRDQDEAASCKSLPKFDLSTWLTGGGPQVHFG
VGCDYCGVRLASLSFLSNFPACTCFQFFYRNKSRESMRGSWIVFRLRMFK

Transcript Sequence

Gene sequence data has not been registered.